Doctoral Students Use NCATS Resources to Investigate Promising Disease Therapies

Doctoral Students Use NCATS Resources to Investigate Promising Disease Therapies

Since 2012, the NIH Oxford-Cambridge Scholars Program has enabled future scientists to work with NCATS researchers to explore the translation of promising new therapies for cancers and tuberculosis. Most recently, OxCam — an accelerated, individualized doctoral training program for outstanding students committed to biomedical research careers — has supported the work of three M.D./Ph.D. students in NCATS’ Division of Pre-Clinical Innovation.

Unlike traditional U.S. doctoral programs, which require two years of courses and research training prior to the start of thesis work, OxCam enables scholars to begin thesis research immediately upon starting the program. The trainees split their research time over four years with scientific mentors at NIH and at Oxford University or Cambridge University in the U.K.

NCATS mentors share their translational science expertise with the scholars, enabling them not only to focus on a specific scientific question but also to learn how to apply translation approaches to research more broadly.

“A key part of NCATS’ mission is to work collaboratively with disease and biology experts on projects designed to demonstrate ways to improve translational research processes and ultimately speed development of new treatments,” said Anton Simeonov, Ph.D., NCATS scientific director. “Mentoring OxCam students in translational science helps form collaborations between NIH and Oxford or Cambridge.”

Developing a new therapy for patients is a multistage process in which the potential therapy is translated from basic research, pre-clinical research, clinical research and clinical implementation to affect public health. As such, multidisciplinary collaborations are crucial for successful translation; no individual or organization can succeed alone. NCATS studies the science of translation to understand the scientific and operational principles underlying each step of the translational process and develops innovative approaches to make the process more efficient. One major area of collaboration at NCATS involves working with disease experts to generate chemical probes for studying human biology, focusing specifically on new therapeutic targets.

Chemical probes are small molecule compounds that can be used to increase or decrease the activity of a biological target in cells or animals. Investigators use these compounds to “probe” the function of molecules such as proteins to understand their roles in health and disease. If appropriate, probes can be optimized to become potential drug candidates. Generating these probes requires the specialized expertise and facilities that NCATS can provide.

The OxCam program provided a new avenue for launching collaborations. With their U.K. mentors and lead mentor Craig Thomas, Ph.D., who heads NCATS’ Chemistry Technology program, three students — Monica Kasbekar, Michael Gormally and Ian Goldlust — have harnessed NCATS’ assay development and high-throughput screening capabilities to identify potential new therapeutics.

For her thesis project, Kasbekar set out to develop a small molecule to probe the metabolism of Mycobacterium tuberculosis, the bacterium that causes tuberculosis, a potentially life-threatening infectious lung disease. In her lab at Cambridge, under the mentorship of biological chemist Chris Abell, FRS, FMedSci, Kasbekar developed an assay to look for the activity of an enzyme called fumarate hydratase, which is involved in the bacterium’s metabolism. She then took the assay to Thomas’ lab to find an inhibitor to block fumarate hydratase. Kasbekar used NCATS’ robotic technology to perform high-throughput screens of a library containing more than 400,000 small molecules.

Unexpectedly, Kasbekar found an inhibitor that was selective for the bacterial version of fumarate hydratase but not the human version. The compound’s selective nature makes it an ideal tuberculosis drug candidate because it would be unlikely to cause toxic side effects in patients. Kasbekar published the results of this work in the July 5, 2016, issue of the Proceedings of the National Academy of Sciences (link is external).

“The OxCam program enabled me to leverage the differing expertise of the Cambridge and NCATS labs to approach problems from different angles, which ultimately led to this discovery,” Kasbekar explained.

The same year that Kasbekar began her work at Cambridge, Goldlust arrived at NCATS to perform high-throughput screens for potential ovarian cancer drugs, using the NCATS Pharmaceutical Collection and the Mechanism Interrogation PlatE (MIPE) library of approved and investigational drugs. Goldlust was searching for agents that could kill ovarian tumor spheroids, tiny clusters of cancer cells that often remain and spread (metastasize) throughout the body after surgical removal of an ovarian tumor.

The screens identified a possible match called elesclomol, a drug originally developed to treat metastatic skin cancer. GoldIust brought the compound to his Cambridge lab and worked with cancer research physician and mentor James Brenton, FRS, FMedSci, to determine the mechanisms by which elesclomol kills ovarian cancer spheroids.

Goldlust noted that these discoveries might not have been possible in a traditional training program. “The OxCam program provides a level of independence that many scientists do not achieve until they are assistant professors,” he said. “We were given almost unlimited access to the resources we needed to answer questions that interested us. That freedom was indispensable.”

Gormally used the OxCam learning environment to explore an even broader research objective: He wanted to find a drug to block FOXM1, a protein that is overactive in many types of cancer. At Cambridge, under the mentorship of biological chemist Shankar Balasubramanian, FRS, FMedSci, Gormally designed an assay to test for FOXM1 activity. Then he brought the assay to NCATS to run a high-throughput screen of a library of more than 54,000 drug-like small molecules.

The experiment yielded several promising inhibitors of FOXM1. Gormally returned to Cambridge and continued to study and characterize the compounds, ultimately generating new insights into how FOXM1 and similar proteins work in cancer cells. He published the results in the Nov. 12, 2014, issue of Nature Communications (link is external).

“NCATS’ resources for high-throughput screening are second to none, and the automation and robotics enabled me to perform many more experiments than would have been possible otherwise,” Gormally said. “And, the training from the OxCam program provided excellent preparation for leading my own research lab in the future.”

All three students currently are finishing their Ph.D. work and will start medical school in fall 2016 to complete the second portion of their doctoral programs. Each anticipates establishing a clinically focused research career, through which they can continue the drug discovery efforts they began in the OxCam program. Meanwhile, their former Ph.D. labs will continue to pursue the therapeutic leads these students uncovered.

“These three students perfectly exemplify what the NIH OxCam Scholars Program aims to produce: young, ambitious and independent investigators who have achieved a high-quality, impactful and collaborative research experience — one they can take with them wherever they go next,” said Rick Fairhurst, M.D., Ph.D., director of the NIH M.D./Ph.D. Partnership Training Program. “I have no doubt that Kasbekar, Goldlust and Gormally each will develop and trial a new therapeutic for human disease at some point in their careers.”

Participation in the OxCam program is just one of the ways that NCATS prioritizes drug discovery collaborations. The focus on training future scientists — in the OxCam program and through other NCATS efforts — provides the nation with a pipeline of promising translational investigators. These critical thinkers will have the skills, experience and knowledge to transform groundbreaking basic research discoveries into therapeutic innovations that benefit more patients more quickly.

”The students who qualify for the OxCam program are remarkable,” Thomas added. “It has been a great experience for NCATS, largely due to their combined efforts and talents.”

(The article was published as a Featured Story on the News and Events page of the National Center for the Advancing Translational Science, August 2016, at https://ncats.nih.gov/pubs/features/oxcam-scholars)

Alliance Appoints Life Sciences Patent Lawyer Jeffrey I. Auerbach to its Board of Directors

Alliance Appoints Life Sciences Patent Lawyer Jeffrey I. Auerbach to its Board of Directors

The International Biomedical Research Alliance announced that Jeffrey I. Auerbach, PhD, is joining the Alliance’s board of directors. Dr. Auerbach is the founder and managing member of AuerbachSchrot LLC, an intellectual property (IP) law firm based in Rockville, Maryland.

“The International Biomedical Research Alliance is always looking for new ways to support the NIH Oxford-Cambridge scholars and broaden their postgraduate medical research training. By partnering with Dr. Auerbach, who has 30 years’ experience in patent licensing, and has provided counsel for some of the most complex biotechnology cases, we will help increase their knowledge of this important arena,” said Stephen M. McLean, chairman of the Alliance Board of Directors. “We are delighted that Dr. Auerbach has agreed to join our Board.”

“This is a wonderful opportunity to help mentor the next generation of medical researchers who are going to shape the future of healthcare,” said Dr. Auerbach. “As a medical researcher and a patent lawyer, I understand many of the questions and challenges that these scholars face and have the experience to be able to provide practical, tangible guidance.”

Dr. Auerbach prepares and litigates bioinformatics, diagnostics, genetics, microbiology, molecular biology and therapeutic patent applications. He is also an expert in protecting global patent rights. Furthermore, he has patents of his own for vaccine production and isothermal “rolling circle” nucleic acid amplification.

He is also an entrepreneur. Dr. Auerbach founded Replicon, Inc., a biotechnology company that used rolling circle amplification in diagnostics, genomics and therapeutics, in 1994 and served as its president for almost eight years until it was acquired by Biokit SA. He then founded DC Associates, LLC, a company that licensed nucleic acid amplification technologies, and was its president for more than a decade.

Dr. Auerbach has an MPhil and a PhD in molecular biophysics and biochemistry from Yale University. He also has a JD from the National Law Center of George Washington University.

NIH OxCam Scholars attend 2016 Lasker Awards and Career Development Events in New York City

NIH OxCam Scholars attend 2016 Lasker Awards and Career Development Events in New York City

lasker-group-photo-2016Once again this September, the International Biomedical Research Alliance was fortunate enough to host six students in the NIH Oxford-Cambridge Scholars Program for a visit to the New York area to meet with science icons.

The trip began on Wednesday, September 21st with a meeting at the newly-opened (August 2016) Roy and Diana Vagelos Education Center at Columbia University Medical Center with P. Roy Vagelos, M.D. Dr. Vagelos is the Chairman of the Board of Regeneron Pharmaceuticals and the retired Board Chairman and Chief Executive Officer of Merck & Co., as well as Board Member Emeritus of the Alliance.

In a conference room within the 14-story glass tower with sweeping views of the Hudson River, Dr. Vagelos related the story of his career – from his humble beginnings and early ambitions to help care for people, to his research at the NIH, in academia, and finally to his rise at Merck, all the while putting humanity at the forefront of his work. Dr. Vagelos played a pivotal role in 1987 in committing Merck to donate Mectizan – as much as needed for as long as need – with the goal to help in eliminating river blindness. Today, the Mectizan Donation Program is the longest-running, disease-specific drug donation program of its kind and has been foundational in the growth of a number of other drug donation programs. The program reaches more than 250 million people in affected areas annually, with more than 2 billion treatments donated since 1987. NIH Oxford-Cambridge Scholar Huayu Ding noted, “I was most impressed by Dr. Vagelos, both in meeting him in person as well as in hearing stories about him from people at Regeneron. He had a clear vision of how science and drug discovery should be carried out and strong principles about how to run a company to help people. In addition, he had an excellent sense of humor.”

The following morning, the scholars traveled to Tarrytown, New York for a day-long visit to the campus of Regeneron Pharmaceuticals. George Yancopoulos, M.D., Ph.D. Founding Scientist, President of Regeneron Laboratories and Chief Scientific Officer, has enthusiastically welcomed NIH Oxford-Cambridge Scholars to his company each September.  The visit included an overview of the company, tour of the facilities, scientific presentations by Regeneron scientists as well as presentations made by the scholars on their research projects.  NIH OxCam Scholar Joanna Cross commented, “As someone who has only been involved in academic research, it was helpful to have first-hand experience [visiting] with a bio-tech company.  The profit side of industry has previously made me apprehensive about leaving academia, but I was impressed that Regeneron is still mainly science-driven.  The equipment available, especially in the genetics section, was amazing.” Scholar Keval Patel remarked, “The opportunity to visit Regeneron was my first exposure to a pharmaceutical company. One thing I noticed during my visit was how proud each person we interacted with was with the work they were conducting.   Dr. Yancopoulos is a great role model for many of us starting our biomedical science careers, and it was inspiring to see his enthusiasm for science, even at this stage in his career, during our presentations.”

Later that evening, the Scholars were the guests of honor at a cocktail reception held in the home of Alliance board member Ann W. Jackson. Guests included individuals representing science, business, academia, private industry, philanthropy, the Lasker Foundation, and New York City area alumni of the program.

The following morning, the group attended the Breakfast at Lasker – an intimate gathering of the 2016 Lasker laureates, the NIH Oxford-Cambridge Scholars, the Lasker Clinical Research Scholars, winners of the 2016 Lasker Essay Contest, and representatives of the Alliance. Moderated by Jordan Gutterman, M.D., the breakfast was a roundtable discussion where the young scientists freely posed questions to the winners in order to gain sage career and life advice.  Recommendations from the laureates were constructive and priceless.

Bruce Albert (University of California, San Francisco), winner of the 2016 Lasker~Koshland Special Achievement Award in Medical Science, reminded the young trainees that the “people at this table do not ask small questions – go for big problems” as they were urged to continue to conduct their research in the face of what may often seem to be a litany of failures. “It was reassuring to hear that the Lasker winners also ran into many obstacles on their road to discovery, and their stories reiterated the point that perseverance and good science will eventually lead to success,” noted Scholar Ding.

William G. Kaelin, Jr. (Dana-Farber Cancer Institute/Harvard Medical School), co-winner of the 2016 Albert Lasker Basic Medical Research Award for his work in oxygen sensing, offered practical advice and emphasized the need for more young scientists to involve themselves in research-related social media discussions in order to advance science communication. He noted that “cancer is like having 9/11 every other day,” and the urgency and importance of research needs to be communicated to the public through all means. The laureates echoed the notion that students should not shy away from being the spokespeople for science.

Referring to the three co-winners of the 2016 Lasker~DeBakey Clinical Medical Research Award (Ralf F. W. Bartenschlager of the University of Heidelberg, Charles M. Rice, of the Rockefeller University, and Michael J. Sofia, formerly at Pharmasset; now at Arbutus Biopharma), Scholar Patel expressed that “It was amazing to meet with the people responsible for the discovery and development of the cure to a disease [Hepatitis C] that, until my second year of medical school, was a lifelong condition for those infected. As a PhD student, it was inspiring to meet successful scientists who had to overcome years of negative results with incredible persistence to make a profound discovery.”

The Scholars raised questions about interviewing for positions where they may be lacking in a specific skill. You “must learn new things on the industry side to be effective at what you do,” urged Sofia. The laureates described techniques as being “enabling but transient.” Scholar Cross added, “After listening to the Lasker winners, it inspired me to be bolder as I move forward in my career.  It is both scary and exciting to leave graduate studies and decide what path I want my career to take, especially if the area lies outside my prior experience.  However, the advice from the winners was to not be put off by unknown techniques but to be brave and show what I can do.”

On the topic of both the advantages and challenges of global collaborations, the laureates agreed that these collaborations are imperative and are becoming easier to manage. One of the strengths of the NIH Global Doctoral Partnerships and the NIH Oxford-Cambridge Scholars Program that the Scholars freely articulate is that negotiating their dual-mentored collaborative projects on both sides of the Atlantic better prepares them for a dynamic research career in a way that few programs can claim. Scholar Cross observed how welcome the Scholars were made to feel: “Everyone was willing to share their experiences and advice and one of the P.I.s approached me to ask my opinion on a discovery his lab had made.  This experience reinforced my belief that collaboration is of the utmost importance and I was grateful for the opportunity to attend.”

The breakfast was followed by the 2016 Lasker Awards luncheon in which Dr. Claire Pomeroy, in her opening remarks, acknowledged the NIH Oxford-Cambridge Scholars Program alongside the Lasker Clinical Research Scholars. Sean Carroll, Vice President of Education at the Howard Hughes Medical Institute and professor of molecular biology, genetics, and medical genetics at the University of Wisconsin-Madison, delivered his keynote address entitled “Seeking Thrills Through Science.” For full descriptive information on the 2016 Lasker Award winners, video viewing of award overviews, and expectance speeches, please visit http://www.laskerfoundation.org/awards/.

In summing up the meetings and events hosted by Dr. Vagelos, the Alliance, Regeneron, the Albert and Mary Lasker Foundation, and the Alliance, Scholar Andrew Breglio commented, “I can’t thank everyone enough for an incredible trip to the Lasker Awards. It was a once-in-a-lifetime opportunity to meet, converse with, and learn from so many influential figures in the world of science and medicine. I think those few days help me gained some clarity in regards to my career trajectory.”